Control or Input for ChIP-seq: The type of control (or 'input') used in ChIP-seq experiments to remove background noise before peak calling.
ControlDescriptionLabel
Control This data represents a control being compared with the other tracks in the set. Control
Control_32bp This data represents a control being compared to experiments using read length of 32 bp 32bp
Control_36bp This data represents a control being compared to experiments using read length of 36 bp Control 36bp
Control_50bp This data represents a control being compared to experiments using read length of 50 bp Control 50bp
Control_eGFP-BACH1 This data represents a control being compared to experiments using antibody eGFP-BACH1 eGFP-BACH1
Control_eGFP-CCNE1 This data represents a control being compared to experiments using antibody eGFP-CCNE1 eGFP-CCNE1
Control_eGFP-CDKN1B This data represents a control being compared to experiments using antibody eGFP-CDKN1B eGFP-CDKN1B
Control_eGFP-ELF1 This data represents a control being compared to experiments using antibody eGFP-ELF1 eGFP-ELF1
Control_eGFP-ESR This data represents a control being compared to experiments using antibody eGFP-ESR eGFP-ESR
Control_eGFP-FOS This data represents a control being compared to experiments using antibody eGFP-FOS eGFP-FOS
Control_eGFP-GATA2 This data represents a control being compared to experiments using antibody eGFP-GATA2 eGFP-GATA2
Control_eGFP-HDAC8 This data represents a control being compared to experiments using antibody eGFP-HDAC8 eGFP-HDAC8
Control_eGFP-ILF2 This data represents a control being compared to experiments using antibody eGFP-ILF2 eGFP-ILF2
Control_eGFP-JunB This data represents a control being compared to experiments using antibody eGFP-JunB eGFP-JunB
Control_eGFP-JunD This data represents a control being compared to experiments using antibody eGFP-JUND eGFP-JUND
Control_eGFP-MLL5 This data represents a control being compared to experiments using antibody eGFP-MLL5 eGFP-MLL5
Control_eGFP-NCOR1 This data represents a control being compared to experiments using antibody eGFP-NCOR1 eGFP-NCOR1
Control_eGFP-NF90 This data represents a control being compared to experiments using antibody eGFP-NF90 eGFP-NF90
Control_eGFP-NR4A1 This data represents a control being compared to experiments using antibody eGFP-NR4A1 eGFP-NR4A1
Control_eGFP-STAT1 This data represents a control being compared to experiments using antibody eGFP-STAT1 eGFP-STAT1
Harvard_Control input library was prepared at Harvard. Harvard Input Control
IgG-goat Input signal from Normal Goat IgG ChIP-seq. IgG-goat
IgG-mus Input signal from Normal Mouse IgG ChIP-seq. IgG-mus
IgG-rab Input signal from Normal Rabbit IgG ChIP-seq. IgG-rab
IgG-rat Input signal from Normal Rat IgG ChIP-seq IgG-rat
IgG-Yale Input signal from Mouse IgG ChIP-seq prepared at Yale IgG-Yale
Input Control signal which may be subtracted from experimental raw signal before peaks are called. Input Control
Large_Fragment Control signal from sonication into large fragments of DNA (350-800 bp). Large Fragment
MNase Input signal from MNase digested DNA. MNase Input Control
Naked_DNA Control signal from Naked DNA. Naked DNA
None No special treatment or protocol applies No treatment or prot
RevXlinkChromatin Sequencing library made from sonicated chromatin whose formaldehyde cross-links have been reversed. These samples serve as controls for peak-calling. RevXlinkChromatin
ripInput Total input for comparison for RIP experiments RIP input
std Standard input signal for most experiments. Standard Control
UCDavis Input library was prepared at UC Davis. UCDavis Input Control

Total = 35