SRP167041 Track Settings

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Homo sapiens Epigenomics [Breast, Plasma] (Human methylome studies)

This track is part of a parent called 'Human methylome studies'. To show other tracks of this parent, go to the Human methylome studies configuration page.

Maximum display mode: Reset to defaults Subtracks⇓ Description⇓

Select views (help):

CpG reads ▾

CpG methylation ▾

AMR

PMD

HMR

Select subtracks by views and experiment:

All	*views*	CpG reads	CpG methylation	AMR	PMD	HMR
*experiment*
SRX4943649
SRX4943650
SRX4943652
SRX4943654
SRX4943655
SRX4943657
SRX4943658
SRX4943659
SRX4943660
SRX4943661
SRX4943663
SRX4943664
SRX4943665
SRX4943666
SRX4943668
SRX4943669
SRX4943670
SRX4943671
SRX4943672
SRX4943673
SRX4943674
SRX4943675
SRX4943676
SRX4943677
SRX4943679
SRX4943681
SRX4943683
SRX4943686
SRX4943687
SRX4943688
SRX4943689
SRX4943690
SRX4943691
SRX4943692
SRX4943697
SRX4943698
SRX4943699
SRX4943701
SRX4943703
SRX4943705
SRX4943706
SRX4943707
SRX4943709
SRX4943710
SRX4943711
SRX4943712
SRX4943713
SRX4943714
SRX4943715
SRX4943716
SRX4943717
SRX4943718
SRX4943719
SRX4943720
SRX4943721
SRX4943722
SRX4943723
SRX4943724
SRX4943725
SRX4943727
SRX4943728
SRX4943729
SRX4943730
SRX4943733
SRX4943736
SRX4943737
SRX4943738
SRX4943739
SRX4943740
SRX4943741
SRX4943742
SRX4943743
SRX4943744
SRX4943745
SRX4943746
SRX4943747
SRX4943748
SRX4943749
SRX4943750
SRX4943751
SRX4943752
SRX4943753
SRX4943754
SRX4943755
SRX4943756
SRX4943757
SRX4943758
SRX4943759
SRX4943760
SRX4943761
SRX4943762
SRX4943763
SRX4943764
SRX4943766
SRX4943767
SRX4943768
SRX4943772
SRX4943773
SRX4943774
SRX4943775
SRX4943777
SRX4943778
SRX4943779
SRX4943780
SRX4943781
SRX4943782
SRX4943783
SRX4943784
SRX4943785
SRX4943786
SRX4943787
SRX4943788
SRX4943790
SRX4943791
SRX4943793
SRX4943794
SRX4943795
SRX4943796
SRX4943797
SRX4943800
SRX4943802
SRX4943803
SRX4943804
SRX4943810
SRX4943811
SRX4943812
*experiment*
All	*views*	CpG reads	CpG methylation	AMR	PMD	HMR

List subtracks: only selected/visible all ()

	experiment^↓1	views^↓2	Track Name^↓3
hide	SRX4943650	HMR	Breast / SRX4943650 (HMR)	schema
hide	SRX4943649	CpG reads	Plasma / SRX4943649 (CpG reads)	schema
hide	SRX4943649	CpG methylation	Plasma / SRX4943649 (CpG methylation)	schema
hide	SRX4943649	AMR	Plasma / SRX4943649 (AMR)	schema
hide	SRX4943649	PMD	Plasma / SRX4943649 (PMD)	schema
hide	SRX4943650	CpG reads	Breast / SRX4943650 (CpG reads)	schema
hide	SRX4943650	CpG methylation	Breast / SRX4943650 (CpG methylation)	schema
hide	SRX4943650	AMR	Breast / SRX4943650 (AMR)	schema
hide	SRX4943650	PMD	Breast / SRX4943650 (PMD)	schema
hide	SRX4943654	HMR	Breast / SRX4943654 (HMR)	schema
hide	SRX4943652	CpG reads	Breast / SRX4943652 (CpG reads)	schema
hide	SRX4943652	CpG methylation	Breast / SRX4943652 (CpG methylation)	schema
hide	SRX4943652	AMR	Breast / SRX4943652 (AMR)	schema
hide	SRX4943652	PMD	Breast / SRX4943652 (PMD)	schema
hide	SRX4943655	HMR	Plasma / SRX4943655 (HMR)	schema
hide	SRX4943654	CpG reads	Breast / SRX4943654 (CpG reads)	schema
hide	SRX4943654	CpG methylation	Breast / SRX4943654 (CpG methylation)	schema
hide	SRX4943654	AMR	Breast / SRX4943654 (AMR)	schema
hide	SRX4943654	PMD	Breast / SRX4943654 (PMD)	schema
hide	SRX4943658	HMR	Plasma / SRX4943658 (HMR)	schema
hide	SRX4943655	CpG reads	Plasma / SRX4943655 (CpG reads)	schema
hide	SRX4943655	CpG methylation	Plasma / SRX4943655 (CpG methylation)	schema
hide	SRX4943655	AMR	Plasma / SRX4943655 (AMR)	schema
hide	SRX4943655	PMD	Plasma / SRX4943655 (PMD)	schema
hide	SRX4943664	HMR	Plasma / SRX4943664 (HMR)	schema
hide	SRX4943657	CpG reads	Plasma / SRX4943657 (CpG reads)	schema
hide	SRX4943657	CpG methylation	Plasma / SRX4943657 (CpG methylation)	schema
hide	SRX4943657	AMR	Plasma / SRX4943657 (AMR)	schema
hide	SRX4943657	PMD	Plasma / SRX4943657 (PMD)	schema
hide	SRX4943666	HMR	Plasma / SRX4943666 (HMR)	schema
hide	SRX4943658	CpG reads	Plasma / SRX4943658 (CpG reads)	schema
hide	SRX4943658	CpG methylation	Plasma / SRX4943658 (CpG methylation)	schema
hide	SRX4943658	AMR	Plasma / SRX4943658 (AMR)	schema
hide	SRX4943658	PMD	Plasma / SRX4943658 (PMD)	schema
hide	SRX4943668	HMR	Plasma / SRX4943668 (HMR)	schema
hide	SRX4943659	CpG reads	Plasma / SRX4943659 (CpG reads)	schema
hide	SRX4943659	CpG methylation	Plasma / SRX4943659 (CpG methylation)	schema
hide	SRX4943659	AMR	Plasma / SRX4943659 (AMR)	schema
hide	SRX4943659	PMD	Plasma / SRX4943659 (PMD)	schema
hide	SRX4943670	HMR	Plasma / SRX4943670 (HMR)	schema
hide	SRX4943660	CpG reads	Plasma / SRX4943660 (CpG reads)	schema
hide	SRX4943660	CpG methylation	Plasma / SRX4943660 (CpG methylation)	schema
hide	SRX4943660	AMR	Plasma / SRX4943660 (AMR)	schema
hide	SRX4943660	PMD	Plasma / SRX4943660 (PMD)	schema
hide	SRX4943671	HMR	Plasma / SRX4943671 (HMR)	schema
hide	SRX4943672	HMR	Breast / SRX4943672 (HMR)	schema
hide	SRX4943661	CpG reads	Plasma / SRX4943661 (CpG reads)	schema
hide	SRX4943661	CpG methylation	Plasma / SRX4943661 (CpG methylation)	schema
hide	SRX4943661	AMR	Plasma / SRX4943661 (AMR)	schema
hide	SRX4943661	PMD	Plasma / SRX4943661 (PMD)	schema
hide	SRX4943663	CpG reads	Plasma / SRX4943663 (CpG reads)	schema
hide	SRX4943663	CpG methylation	Plasma / SRX4943663 (CpG methylation)	schema
hide	SRX4943663	AMR	Plasma / SRX4943663 (AMR)	schema
hide	SRX4943663	PMD	Plasma / SRX4943663 (PMD)	schema
hide	SRX4943673	HMR	Plasma / SRX4943673 (HMR)	schema
hide	SRX4943664	CpG reads	Plasma / SRX4943664 (CpG reads)	schema
hide	SRX4943664	CpG methylation	Plasma / SRX4943664 (CpG methylation)	schema
hide	SRX4943664	AMR	Plasma / SRX4943664 (AMR)	schema
hide	SRX4943664	PMD	Plasma / SRX4943664 (PMD)	schema
hide	SRX4943675	HMR	Plasma / SRX4943675 (HMR)	schema
hide	SRX4943665	CpG reads	Plasma / SRX4943665 (CpG reads)	schema
hide	SRX4943665	CpG methylation	Plasma / SRX4943665 (CpG methylation)	schema
hide	SRX4943665	AMR	Plasma / SRX4943665 (AMR)	schema
hide	SRX4943665	PMD	Plasma / SRX4943665 (PMD)	schema
hide	SRX4943676	HMR	Plasma / SRX4943676 (HMR)	schema
hide	SRX4943666	CpG reads	Plasma / SRX4943666 (CpG reads)	schema
hide	SRX4943666	CpG methylation	Plasma / SRX4943666 (CpG methylation)	schema
hide	SRX4943666	AMR	Plasma / SRX4943666 (AMR)	schema
hide	SRX4943666	PMD	Plasma / SRX4943666 (PMD)	schema
hide	SRX4943677	HMR	Plasma / SRX4943677 (HMR)	schema
hide	SRX4943668	CpG reads	Plasma / SRX4943668 (CpG reads)	schema
hide	SRX4943668	CpG methylation	Plasma / SRX4943668 (CpG methylation)	schema
hide	SRX4943668	AMR	Plasma / SRX4943668 (AMR)	schema
hide	SRX4943668	PMD	Plasma / SRX4943668 (PMD)	schema
hide	SRX4943679	HMR	Plasma / SRX4943679 (HMR)	schema
hide	SRX4943669	CpG reads	Plasma / SRX4943669 (CpG reads)	schema
hide	SRX4943669	CpG methylation	Plasma / SRX4943669 (CpG methylation)	schema
hide	SRX4943669	AMR	Plasma / SRX4943669 (AMR)	schema
hide	SRX4943669	PMD	Plasma / SRX4943669 (PMD)	schema
hide	SRX4943681	HMR	Plasma / SRX4943681 (HMR)	schema
hide	SRX4943670	AMR	Plasma / SRX4943670 (AMR)	schema
hide	SRX4943670	PMD	Plasma / SRX4943670 (PMD)	schema
hide	SRX4943683	HMR	Plasma / SRX4943683 (HMR)	schema
hide	SRX4943670	CpG reads	Plasma / SRX4943670 (CpG reads)	schema
hide	SRX4943670	CpG methylation	Plasma / SRX4943670 (CpG methylation)	schema
hide	SRX4943671	CpG reads	Plasma / SRX4943671 (CpG reads)	schema
hide	SRX4943671	CpG methylation	Plasma / SRX4943671 (CpG methylation)	schema
hide	SRX4943671	AMR	Plasma / SRX4943671 (AMR)	schema
hide	SRX4943671	PMD	Plasma / SRX4943671 (PMD)	schema
hide	SRX4943687	HMR	Plasma / SRX4943687 (HMR)	schema
hide	SRX4943672	CpG reads	Breast / SRX4943672 (CpG reads)	schema
hide	SRX4943672	CpG methylation	Breast / SRX4943672 (CpG methylation)	schema
hide	SRX4943672	AMR	Breast / SRX4943672 (AMR)	schema
hide	SRX4943672	PMD	Breast / SRX4943672 (PMD)	schema
hide	SRX4943688	HMR	Breast / SRX4943688 (HMR)	schema
hide	SRX4943689	HMR	Breast / SRX4943689 (HMR)	schema
hide	SRX4943673	CpG reads	Plasma / SRX4943673 (CpG reads)	schema
hide	SRX4943673	CpG methylation	Plasma / SRX4943673 (CpG methylation)	schema
hide	SRX4943673	AMR	Plasma / SRX4943673 (AMR)	schema
hide	SRX4943673	PMD	Plasma / SRX4943673 (PMD)	schema
hide	SRX4943690	HMR	Breast / SRX4943690 (HMR)	schema
hide	SRX4943674	CpG reads	Plasma / SRX4943674 (CpG reads)	schema
hide	SRX4943674	CpG methylation	Plasma / SRX4943674 (CpG methylation)	schema
hide	SRX4943674	AMR	Plasma / SRX4943674 (AMR)	schema
hide	SRX4943674	PMD	Plasma / SRX4943674 (PMD)	schema
hide	SRX4943691	HMR	Breast / SRX4943691 (HMR)	schema
hide	SRX4943675	CpG reads	Plasma / SRX4943675 (CpG reads)	schema
hide	SRX4943675	CpG methylation	Plasma / SRX4943675 (CpG methylation)	schema
hide	SRX4943675	AMR	Plasma / SRX4943675 (AMR)	schema
hide	SRX4943675	PMD	Plasma / SRX4943675 (PMD)	schema
hide	SRX4943676	CpG reads	Plasma / SRX4943676 (CpG reads)	schema
hide	SRX4943676	CpG methylation	Plasma / SRX4943676 (CpG methylation)	schema
hide	SRX4943676	AMR	Plasma / SRX4943676 (AMR)	schema
hide	SRX4943676	PMD	Plasma / SRX4943676 (PMD)	schema
hide	SRX4943697	HMR	Plasma / SRX4943697 (HMR)	schema
hide	SRX4943677	CpG reads	Plasma / SRX4943677 (CpG reads)	schema
hide	SRX4943677	CpG methylation	Plasma / SRX4943677 (CpG methylation)	schema
hide	SRX4943677	AMR	Plasma / SRX4943677 (AMR)	schema
hide	SRX4943677	PMD	Plasma / SRX4943677 (PMD)	schema
hide	SRX4943698	HMR	Plasma / SRX4943698 (HMR)	schema
hide	SRX4943679	CpG reads	Plasma / SRX4943679 (CpG reads)	schema
hide	SRX4943679	CpG methylation	Plasma / SRX4943679 (CpG methylation)	schema
hide	SRX4943679	AMR	Plasma / SRX4943679 (AMR)	schema
hide	SRX4943679	PMD	Plasma / SRX4943679 (PMD)	schema
hide	SRX4943699	HMR	Plasma / SRX4943699 (HMR)	schema
hide	SRX4943681	CpG reads	Plasma / SRX4943681 (CpG reads)	schema
hide	SRX4943681	CpG methylation	Plasma / SRX4943681 (CpG methylation)	schema
hide	SRX4943681	AMR	Plasma / SRX4943681 (AMR)	schema
hide	SRX4943681	PMD	Plasma / SRX4943681 (PMD)	schema
hide	SRX4943701	HMR	Plasma / SRX4943701 (HMR)	schema
hide	SRX4943683	CpG reads	Plasma / SRX4943683 (CpG reads)	schema
hide	SRX4943683	CpG methylation	Plasma / SRX4943683 (CpG methylation)	schema
hide	SRX4943683	AMR	Plasma / SRX4943683 (AMR)	schema
hide	SRX4943683	PMD	Plasma / SRX4943683 (PMD)	schema
hide	SRX4943703	HMR	Plasma / SRX4943703 (HMR)	schema
hide	SRX4943686	CpG reads	Plasma / SRX4943686 (CpG reads)	schema
hide	SRX4943686	CpG methylation	Plasma / SRX4943686 (CpG methylation)	schema
hide	SRX4943686	AMR	Plasma / SRX4943686 (AMR)	schema
hide	SRX4943686	PMD	Plasma / SRX4943686 (PMD)	schema
hide	SRX4943706	HMR	Plasma / SRX4943706 (HMR)	schema
hide	SRX4943687	CpG reads	Plasma / SRX4943687 (CpG reads)	schema
hide	SRX4943687	CpG methylation	Plasma / SRX4943687 (CpG methylation)	schema
hide	SRX4943687	AMR	Plasma / SRX4943687 (AMR)	schema
hide	SRX4943687	PMD	Plasma / SRX4943687 (PMD)	schema
hide	SRX4943707	HMR	Plasma / SRX4943707 (HMR)	schema
hide	SRX4943688	CpG reads	Breast / SRX4943688 (CpG reads)	schema
hide	SRX4943688	CpG methylation	Breast / SRX4943688 (CpG methylation)	schema
hide	SRX4943688	AMR	Breast / SRX4943688 (AMR)	schema
hide	SRX4943688	PMD	Breast / SRX4943688 (PMD)	schema
hide	SRX4943712	HMR	Plasma / SRX4943712 (HMR)	schema
hide	SRX4943689	CpG reads	Breast / SRX4943689 (CpG reads)	schema
hide	SRX4943689	CpG methylation	Breast / SRX4943689 (CpG methylation)	schema
hide	SRX4943689	AMR	Breast / SRX4943689 (AMR)	schema
hide	SRX4943689	PMD	Breast / SRX4943689 (PMD)	schema
hide	SRX4943714	HMR	Plasma / SRX4943714 (HMR)	schema
hide	SRX4943690	CpG reads	Breast / SRX4943690 (CpG reads)	schema
hide	SRX4943690	CpG methylation	Breast / SRX4943690 (CpG methylation)	schema
hide	SRX4943690	AMR	Breast / SRX4943690 (AMR)	schema
hide	SRX4943690	PMD	Breast / SRX4943690 (PMD)	schema
hide	SRX4943716	HMR	Plasma / SRX4943716 (HMR)	schema
hide	SRX4943691	CpG reads	Breast / SRX4943691 (CpG reads)	schema
hide	SRX4943691	CpG methylation	Breast / SRX4943691 (CpG methylation)	schema
hide	SRX4943691	AMR	Breast / SRX4943691 (AMR)	schema
hide	SRX4943691	PMD	Breast / SRX4943691 (PMD)	schema
hide	SRX4943717	HMR	Plasma / SRX4943717 (HMR)	schema
hide	SRX4943692	CpG reads	Plasma / SRX4943692 (CpG reads)	schema
hide	SRX4943692	CpG methylation	Plasma / SRX4943692 (CpG methylation)	schema
hide	SRX4943692	AMR	Plasma / SRX4943692 (AMR)	schema
hide	SRX4943692	PMD	Plasma / SRX4943692 (PMD)	schema
hide	SRX4943719	HMR	Plasma / SRX4943719 (HMR)	schema
hide	SRX4943697	CpG reads	Plasma / SRX4943697 (CpG reads)	schema
hide	SRX4943697	CpG methylation	Plasma / SRX4943697 (CpG methylation)	schema
hide	SRX4943697	AMR	Plasma / SRX4943697 (AMR)	schema
hide	SRX4943697	PMD	Plasma / SRX4943697 (PMD)	schema
hide	SRX4943720	HMR	Plasma / SRX4943720 (HMR)	schema
hide	SRX4943698	AMR	Plasma / SRX4943698 (AMR)	schema
hide	SRX4943698	PMD	Plasma / SRX4943698 (PMD)	schema
hide	SRX4943722	HMR	Plasma / SRX4943722 (HMR)	schema
hide	SRX4943698	CpG reads	Plasma / SRX4943698 (CpG reads)	schema
hide	SRX4943698	CpG methylation	Plasma / SRX4943698 (CpG methylation)	schema
hide	SRX4943699	CpG reads	Plasma / SRX4943699 (CpG reads)	schema
hide	SRX4943699	CpG methylation	Plasma / SRX4943699 (CpG methylation)	schema
hide	SRX4943699	AMR	Plasma / SRX4943699 (AMR)	schema
hide	SRX4943699	PMD	Plasma / SRX4943699 (PMD)	schema
hide	SRX4943723	HMR	Plasma / SRX4943723 (HMR)	schema
hide	SRX4943701	CpG reads	Plasma / SRX4943701 (CpG reads)	schema
hide	SRX4943701	CpG methylation	Plasma / SRX4943701 (CpG methylation)	schema
hide	SRX4943701	AMR	Plasma / SRX4943701 (AMR)	schema
hide	SRX4943701	PMD	Plasma / SRX4943701 (PMD)	schema
hide	SRX4943724	HMR	Plasma / SRX4943724 (HMR)	schema
hide	SRX4943725	HMR	Plasma / SRX4943725 (HMR)	schema
hide	SRX4943703	CpG reads	Plasma / SRX4943703 (CpG reads)	schema
hide	SRX4943703	CpG methylation	Plasma / SRX4943703 (CpG methylation)	schema
hide	SRX4943703	AMR	Plasma / SRX4943703 (AMR)	schema
hide	SRX4943703	PMD	Plasma / SRX4943703 (PMD)	schema
hide	SRX4943705	CpG reads	Plasma / SRX4943705 (CpG reads)	schema
hide	SRX4943705	CpG methylation	Plasma / SRX4943705 (CpG methylation)	schema
hide	SRX4943705	AMR	Plasma / SRX4943705 (AMR)	schema
hide	SRX4943705	PMD	Plasma / SRX4943705 (PMD)	schema
hide	SRX4943727	HMR	Plasma / SRX4943727 (HMR)	schema
hide	SRX4943706	CpG reads	Plasma / SRX4943706 (CpG reads)	schema
hide	SRX4943706	CpG methylation	Plasma / SRX4943706 (CpG methylation)	schema
hide	SRX4943706	AMR	Plasma / SRX4943706 (AMR)	schema
hide	SRX4943706	PMD	Plasma / SRX4943706 (PMD)	schema
hide	SRX4943728	HMR	Plasma / SRX4943728 (HMR)	schema
hide	SRX4943707	CpG reads	Plasma / SRX4943707 (CpG reads)	schema
hide	SRX4943707	CpG methylation	Plasma / SRX4943707 (CpG methylation)	schema
hide	SRX4943707	AMR	Plasma / SRX4943707 (AMR)	schema
hide	SRX4943707	PMD	Plasma / SRX4943707 (PMD)	schema
hide	SRX4943730	HMR	Plasma / SRX4943730 (HMR)	schema
hide	SRX4943709	CpG reads	Plasma / SRX4943709 (CpG reads)	schema
hide	SRX4943709	CpG methylation	Plasma / SRX4943709 (CpG methylation)	schema
hide	SRX4943709	AMR	Plasma / SRX4943709 (AMR)	schema
hide	SRX4943709	PMD	Plasma / SRX4943709 (PMD)	schema
hide	SRX4943733	HMR	Plasma / SRX4943733 (HMR)	schema
hide	SRX4943710	CpG reads	Plasma / SRX4943710 (CpG reads)	schema
hide	SRX4943710	CpG methylation	Plasma / SRX4943710 (CpG methylation)	schema
hide	SRX4943710	AMR	Plasma / SRX4943710 (AMR)	schema
hide	SRX4943710	PMD	Plasma / SRX4943710 (PMD)	schema
hide	SRX4943737	HMR	Plasma / SRX4943737 (HMR)	schema
hide	SRX4943711	CpG reads	Plasma / SRX4943711 (CpG reads)	schema
hide	SRX4943711	CpG methylation	Plasma / SRX4943711 (CpG methylation)	schema
hide	SRX4943711	AMR	Plasma / SRX4943711 (AMR)	schema
hide	SRX4943711	PMD	Plasma / SRX4943711 (PMD)	schema
hide	SRX4943738	HMR	Plasma / SRX4943738 (HMR)	schema
hide	SRX4943712	CpG reads	Plasma / SRX4943712 (CpG reads)	schema
hide	SRX4943712	CpG methylation	Plasma / SRX4943712 (CpG methylation)	schema
hide	SRX4943712	AMR	Plasma / SRX4943712 (AMR)	schema
hide	SRX4943712	PMD	Plasma / SRX4943712 (PMD)	schema
hide	SRX4943739	HMR	Plasma / SRX4943739 (HMR)	schema
hide	SRX4943713	CpG reads	Plasma / SRX4943713 (CpG reads)	schema
hide	SRX4943713	CpG methylation	Plasma / SRX4943713 (CpG methylation)	schema
hide	SRX4943713	AMR	Plasma / SRX4943713 (AMR)	schema
hide	SRX4943713	PMD	Plasma / SRX4943713 (PMD)	schema
hide	SRX4943740	HMR	Plasma / SRX4943740 (HMR)	schema
hide	SRX4943714	CpG reads	Plasma / SRX4943714 (CpG reads)	schema
hide	SRX4943714	CpG methylation	Plasma / SRX4943714 (CpG methylation)	schema
hide	SRX4943714	AMR	Plasma / SRX4943714 (AMR)	schema
hide	SRX4943714	PMD	Plasma / SRX4943714 (PMD)	schema
hide	SRX4943742	HMR	Plasma / SRX4943742 (HMR)	schema
hide	SRX4943715	CpG reads	Plasma / SRX4943715 (CpG reads)	schema
hide	SRX4943715	CpG methylation	Plasma / SRX4943715 (CpG methylation)	schema
hide	SRX4943715	AMR	Plasma / SRX4943715 (AMR)	schema
hide	SRX4943715	PMD	Plasma / SRX4943715 (PMD)	schema
hide	SRX4943743	HMR	Plasma / SRX4943743 (HMR)	schema
hide	SRX4943716	CpG reads	Plasma / SRX4943716 (CpG reads)	schema
hide	SRX4943716	CpG methylation	Plasma / SRX4943716 (CpG methylation)	schema
hide	SRX4943716	AMR	Plasma / SRX4943716 (AMR)	schema
hide	SRX4943716	PMD	Plasma / SRX4943716 (PMD)	schema
hide	SRX4943744	HMR	Plasma / SRX4943744 (HMR)	schema
hide	SRX4943717	CpG reads	Plasma / SRX4943717 (CpG reads)	schema
hide	SRX4943717	CpG methylation	Plasma / SRX4943717 (CpG methylation)	schema
hide	SRX4943717	AMR	Plasma / SRX4943717 (AMR)	schema
hide	SRX4943717	PMD	Plasma / SRX4943717 (PMD)	schema
hide	SRX4943745	HMR	Plasma / SRX4943745 (HMR)	schema
hide	SRX4943718	CpG reads	Plasma / SRX4943718 (CpG reads)	schema
hide	SRX4943718	CpG methylation	Plasma / SRX4943718 (CpG methylation)	schema
hide	SRX4943718	AMR	Plasma / SRX4943718 (AMR)	schema
hide	SRX4943718	PMD	Plasma / SRX4943718 (PMD)	schema
hide	SRX4943746	HMR	Plasma / SRX4943746 (HMR)	schema
hide	SRX4943719	CpG reads	Plasma / SRX4943719 (CpG reads)	schema
hide	SRX4943719	CpG methylation	Plasma / SRX4943719 (CpG methylation)	schema
hide	SRX4943719	AMR	Plasma / SRX4943719 (AMR)	schema
hide	SRX4943719	PMD	Plasma / SRX4943719 (PMD)	schema
hide	SRX4943748	HMR	Plasma / SRX4943748 (HMR)	schema
hide	SRX4943720	CpG reads	Plasma / SRX4943720 (CpG reads)	schema
hide	SRX4943720	CpG methylation	Plasma / SRX4943720 (CpG methylation)	schema
hide	SRX4943720	AMR	Plasma / SRX4943720 (AMR)	schema
hide	SRX4943720	PMD	Plasma / SRX4943720 (PMD)	schema
hide	SRX4943749	HMR	Plasma / SRX4943749 (HMR)	schema
hide	SRX4943721	AMR	Plasma / SRX4943721 (AMR)	schema
hide	SRX4943721	PMD	Plasma / SRX4943721 (PMD)	schema
hide	SRX4943750	HMR	Plasma / SRX4943750 (HMR)	schema
hide	SRX4943721	CpG reads	Plasma / SRX4943721 (CpG reads)	schema
hide	SRX4943721	CpG methylation	Plasma / SRX4943721 (CpG methylation)	schema
hide	SRX4943722	CpG reads	Plasma / SRX4943722 (CpG reads)	schema
hide	SRX4943722	CpG methylation	Plasma / SRX4943722 (CpG methylation)	schema
hide	SRX4943722	AMR	Plasma / SRX4943722 (AMR)	schema
hide	SRX4943722	PMD	Plasma / SRX4943722 (PMD)	schema
hide	SRX4943751	HMR	Plasma / SRX4943751 (HMR)	schema
hide	SRX4943723	CpG reads	Plasma / SRX4943723 (CpG reads)	schema
hide	SRX4943723	CpG methylation	Plasma / SRX4943723 (CpG methylation)	schema
hide	SRX4943723	AMR	Plasma / SRX4943723 (AMR)	schema
hide	SRX4943723	PMD	Plasma / SRX4943723 (PMD)	schema
hide	SRX4943752	HMR	Plasma / SRX4943752 (HMR)	schema
hide	SRX4943753	HMR	Plasma / SRX4943753 (HMR)	schema
hide	SRX4943724	CpG reads	Plasma / SRX4943724 (CpG reads)	schema
hide	SRX4943724	CpG methylation	Plasma / SRX4943724 (CpG methylation)	schema
hide	SRX4943724	AMR	Plasma / SRX4943724 (AMR)	schema
hide	SRX4943724	PMD	Plasma / SRX4943724 (PMD)	schema
hide	SRX4943725	CpG reads	Plasma / SRX4943725 (CpG reads)	schema
hide	SRX4943725	CpG methylation	Plasma / SRX4943725 (CpG methylation)	schema
hide	SRX4943725	AMR	Plasma / SRX4943725 (AMR)	schema
hide	SRX4943725	PMD	Plasma / SRX4943725 (PMD)	schema
hide	SRX4943754	HMR	Plasma / SRX4943754 (HMR)	schema
hide	SRX4943727	CpG reads	Plasma / SRX4943727 (CpG reads)	schema
hide	SRX4943727	CpG methylation	Plasma / SRX4943727 (CpG methylation)	schema
hide	SRX4943727	AMR	Plasma / SRX4943727 (AMR)	schema
hide	SRX4943727	PMD	Plasma / SRX4943727 (PMD)	schema
hide	SRX4943755	HMR	Plasma / SRX4943755 (HMR)	schema
hide	SRX4943728	CpG reads	Plasma / SRX4943728 (CpG reads)	schema
hide	SRX4943728	CpG methylation	Plasma / SRX4943728 (CpG methylation)	schema
hide	SRX4943728	AMR	Plasma / SRX4943728 (AMR)	schema
hide	SRX4943728	PMD	Plasma / SRX4943728 (PMD)	schema
hide	SRX4943756	HMR	Plasma / SRX4943756 (HMR)	schema
hide	SRX4943729	CpG reads	Plasma / SRX4943729 (CpG reads)	schema
hide	SRX4943729	CpG methylation	Plasma / SRX4943729 (CpG methylation)	schema
hide	SRX4943729	AMR	Plasma / SRX4943729 (AMR)	schema
hide	SRX4943729	PMD	Plasma / SRX4943729 (PMD)	schema
hide	SRX4943757	HMR	Plasma / SRX4943757 (HMR)	schema
hide	SRX4943730	CpG reads	Plasma / SRX4943730 (CpG reads)	schema
hide	SRX4943730	CpG methylation	Plasma / SRX4943730 (CpG methylation)	schema
hide	SRX4943730	AMR	Plasma / SRX4943730 (AMR)	schema
hide	SRX4943730	PMD	Plasma / SRX4943730 (PMD)	schema
hide	SRX4943761	HMR	Plasma / SRX4943761 (HMR)	schema
hide	SRX4943733	CpG reads	Plasma / SRX4943733 (CpG reads)	schema
hide	SRX4943733	CpG methylation	Plasma / SRX4943733 (CpG methylation)	schema
hide	SRX4943733	AMR	Plasma / SRX4943733 (AMR)	schema
hide	SRX4943733	PMD	Plasma / SRX4943733 (PMD)	schema
hide	SRX4943763	HMR	Plasma / SRX4943763 (HMR)	schema
hide	SRX4943736	CpG reads	Plasma / SRX4943736 (CpG reads)	schema
hide	SRX4943736	CpG methylation	Plasma / SRX4943736 (CpG methylation)	schema
hide	SRX4943736	AMR	Plasma / SRX4943736 (AMR)	schema
hide	SRX4943736	PMD	Plasma / SRX4943736 (PMD)	schema
hide	SRX4943764	HMR	Plasma / SRX4943764 (HMR)	schema
hide	SRX4943737	CpG reads	Plasma / SRX4943737 (CpG reads)	schema
hide	SRX4943737	CpG methylation	Plasma / SRX4943737 (CpG methylation)	schema
hide	SRX4943737	AMR	Plasma / SRX4943737 (AMR)	schema
hide	SRX4943737	PMD	Plasma / SRX4943737 (PMD)	schema
hide	SRX4943766	HMR	Plasma / SRX4943766 (HMR)	schema
hide	SRX4943738	CpG reads	Plasma / SRX4943738 (CpG reads)	schema
hide	SRX4943738	CpG methylation	Plasma / SRX4943738 (CpG methylation)	schema
hide	SRX4943738	AMR	Plasma / SRX4943738 (AMR)	schema
hide	SRX4943738	PMD	Plasma / SRX4943738 (PMD)	schema
hide	SRX4943767	HMR	Plasma / SRX4943767 (HMR)	schema
hide	SRX4943739	CpG reads	Plasma / SRX4943739 (CpG reads)	schema
hide	SRX4943739	CpG methylation	Plasma / SRX4943739 (CpG methylation)	schema
hide	SRX4943739	AMR	Plasma / SRX4943739 (AMR)	schema
hide	SRX4943739	PMD	Plasma / SRX4943739 (PMD)	schema
hide	SRX4943768	HMR	Plasma / SRX4943768 (HMR)	schema
hide	SRX4943740	CpG reads	Plasma / SRX4943740 (CpG reads)	schema
hide	SRX4943740	CpG methylation	Plasma / SRX4943740 (CpG methylation)	schema
hide	SRX4943740	AMR	Plasma / SRX4943740 (AMR)	schema
hide	SRX4943740	PMD	Plasma / SRX4943740 (PMD)	schema
hide	SRX4943772	HMR	Plasma / SRX4943772 (HMR)	schema
hide	SRX4943741	CpG reads	Plasma / SRX4943741 (CpG reads)	schema
hide	SRX4943741	CpG methylation	Plasma / SRX4943741 (CpG methylation)	schema
hide	SRX4943741	AMR	Plasma / SRX4943741 (AMR)	schema
hide	SRX4943741	PMD	Plasma / SRX4943741 (PMD)	schema
hide	SRX4943773	HMR	Plasma / SRX4943773 (HMR)	schema
hide	SRX4943742	CpG reads	Plasma / SRX4943742 (CpG reads)	schema
hide	SRX4943742	CpG methylation	Plasma / SRX4943742 (CpG methylation)	schema
hide	SRX4943742	AMR	Plasma / SRX4943742 (AMR)	schema
hide	SRX4943742	PMD	Plasma / SRX4943742 (PMD)	schema
hide	SRX4943774	HMR	Plasma / SRX4943774 (HMR)	schema
hide	SRX4943743	CpG reads	Plasma / SRX4943743 (CpG reads)	schema
hide	SRX4943743	CpG methylation	Plasma / SRX4943743 (CpG methylation)	schema
hide	SRX4943743	AMR	Plasma / SRX4943743 (AMR)	schema
hide	SRX4943743	PMD	Plasma / SRX4943743 (PMD)	schema
hide	SRX4943775	HMR	Plasma / SRX4943775 (HMR)	schema
hide	SRX4943744	CpG reads	Plasma / SRX4943744 (CpG reads)	schema
hide	SRX4943744	CpG methylation	Plasma / SRX4943744 (CpG methylation)	schema
hide	SRX4943744	AMR	Plasma / SRX4943744 (AMR)	schema
hide	SRX4943744	PMD	Plasma / SRX4943744 (PMD)	schema
hide	SRX4943777	HMR	Plasma / SRX4943777 (HMR)	schema
hide	SRX4943745	AMR	Plasma / SRX4943745 (AMR)	schema
hide	SRX4943745	PMD	Plasma / SRX4943745 (PMD)	schema
hide	SRX4943778	HMR	Plasma / SRX4943778 (HMR)	schema
hide	SRX4943745	CpG reads	Plasma / SRX4943745 (CpG reads)	schema
hide	SRX4943745	CpG methylation	Plasma / SRX4943745 (CpG methylation)	schema
hide	SRX4943746	CpG reads	Plasma / SRX4943746 (CpG reads)	schema
hide	SRX4943746	CpG methylation	Plasma / SRX4943746 (CpG methylation)	schema
hide	SRX4943746	AMR	Plasma / SRX4943746 (AMR)	schema
hide	SRX4943746	PMD	Plasma / SRX4943746 (PMD)	schema
hide	SRX4943779	HMR	Plasma / SRX4943779 (HMR)	schema
hide	SRX4943747	CpG reads	Plasma / SRX4943747 (CpG reads)	schema
hide	SRX4943747	CpG methylation	Plasma / SRX4943747 (CpG methylation)	schema
hide	SRX4943747	AMR	Plasma / SRX4943747 (AMR)	schema
hide	SRX4943747	PMD	Plasma / SRX4943747 (PMD)	schema
hide	SRX4943781	HMR	Plasma / SRX4943781 (HMR)	schema
hide	SRX4943782	HMR	Plasma / SRX4943782 (HMR)	schema
hide	SRX4943748	CpG reads	Plasma / SRX4943748 (CpG reads)	schema
hide	SRX4943748	CpG methylation	Plasma / SRX4943748 (CpG methylation)	schema
hide	SRX4943748	AMR	Plasma / SRX4943748 (AMR)	schema
hide	SRX4943748	PMD	Plasma / SRX4943748 (PMD)	schema
hide	SRX4943749	CpG reads	Plasma / SRX4943749 (CpG reads)	schema
hide	SRX4943749	CpG methylation	Plasma / SRX4943749 (CpG methylation)	schema
hide	SRX4943749	AMR	Plasma / SRX4943749 (AMR)	schema
hide	SRX4943749	PMD	Plasma / SRX4943749 (PMD)	schema
hide	SRX4943783	HMR	Plasma / SRX4943783 (HMR)	schema
hide	SRX4943750	CpG reads	Plasma / SRX4943750 (CpG reads)	schema
hide	SRX4943750	CpG methylation	Plasma / SRX4943750 (CpG methylation)	schema
hide	SRX4943750	AMR	Plasma / SRX4943750 (AMR)	schema
hide	SRX4943750	PMD	Plasma / SRX4943750 (PMD)	schema
hide	SRX4943785	HMR	Plasma / SRX4943785 (HMR)	schema
hide	SRX4943751	CpG reads	Plasma / SRX4943751 (CpG reads)	schema
hide	SRX4943751	CpG methylation	Plasma / SRX4943751 (CpG methylation)	schema
hide	SRX4943751	AMR	Plasma / SRX4943751 (AMR)	schema
hide	SRX4943751	PMD	Plasma / SRX4943751 (PMD)	schema
hide	SRX4943786	HMR	Plasma / SRX4943786 (HMR)	schema
hide	SRX4943752	CpG reads	Plasma / SRX4943752 (CpG reads)	schema
hide	SRX4943752	CpG methylation	Plasma / SRX4943752 (CpG methylation)	schema
hide	SRX4943752	AMR	Plasma / SRX4943752 (AMR)	schema
hide	SRX4943752	PMD	Plasma / SRX4943752 (PMD)	schema
hide	SRX4943787	HMR	Plasma / SRX4943787 (HMR)	schema
hide	SRX4943753	CpG reads	Plasma / SRX4943753 (CpG reads)	schema
hide	SRX4943753	CpG methylation	Plasma / SRX4943753 (CpG methylation)	schema
hide	SRX4943753	AMR	Plasma / SRX4943753 (AMR)	schema
hide	SRX4943753	PMD	Plasma / SRX4943753 (PMD)	schema
hide	SRX4943790	HMR	Plasma / SRX4943790 (HMR)	schema
hide	SRX4943754	CpG reads	Plasma / SRX4943754 (CpG reads)	schema
hide	SRX4943754	CpG methylation	Plasma / SRX4943754 (CpG methylation)	schema
hide	SRX4943754	AMR	Plasma / SRX4943754 (AMR)	schema
hide	SRX4943754	PMD	Plasma / SRX4943754 (PMD)	schema
hide	SRX4943794	HMR	Plasma / SRX4943794 (HMR)	schema
hide	SRX4943755	CpG reads	Plasma / SRX4943755 (CpG reads)	schema
hide	SRX4943755	CpG methylation	Plasma / SRX4943755 (CpG methylation)	schema
hide	SRX4943755	AMR	Plasma / SRX4943755 (AMR)	schema
hide	SRX4943755	PMD	Plasma / SRX4943755 (PMD)	schema
hide	SRX4943797	HMR	Plasma / SRX4943797 (HMR)	schema
hide	SRX4943756	CpG reads	Plasma / SRX4943756 (CpG reads)	schema
hide	SRX4943756	CpG methylation	Plasma / SRX4943756 (CpG methylation)	schema
hide	SRX4943756	AMR	Plasma / SRX4943756 (AMR)	schema
hide	SRX4943756	PMD	Plasma / SRX4943756 (PMD)	schema
hide	SRX4943800	HMR	Plasma / SRX4943800 (HMR)	schema
hide	SRX4943757	CpG reads	Plasma / SRX4943757 (CpG reads)	schema
hide	SRX4943757	CpG methylation	Plasma / SRX4943757 (CpG methylation)	schema
hide	SRX4943757	AMR	Plasma / SRX4943757 (AMR)	schema
hide	SRX4943757	PMD	Plasma / SRX4943757 (PMD)	schema
hide	SRX4943803	HMR	Plasma / SRX4943803 (HMR)	schema
hide	SRX4943758	CpG reads	Plasma / SRX4943758 (CpG reads)	schema
hide	SRX4943758	CpG methylation	Plasma / SRX4943758 (CpG methylation)	schema
hide	SRX4943758	AMR	Plasma / SRX4943758 (AMR)	schema
hide	SRX4943758	PMD	Plasma / SRX4943758 (PMD)	schema
hide	SRX4943804	HMR	Plasma / SRX4943804 (HMR)	schema
hide	SRX4943759	CpG reads	Plasma / SRX4943759 (CpG reads)	schema
hide	SRX4943759	CpG methylation	Plasma / SRX4943759 (CpG methylation)	schema
hide	SRX4943759	AMR	Plasma / SRX4943759 (AMR)	schema
hide	SRX4943759	PMD	Plasma / SRX4943759 (PMD)	schema
hide	SRX4943810	HMR	Plasma / SRX4943810 (HMR)	schema
hide	SRX4943760	CpG reads	Plasma / SRX4943760 (CpG reads)	schema
hide	SRX4943760	CpG methylation	Plasma / SRX4943760 (CpG methylation)	schema
hide	SRX4943760	AMR	Plasma / SRX4943760 (AMR)	schema
hide	SRX4943760	PMD	Plasma / SRX4943760 (PMD)	schema
hide	SRX4943812	HMR	Plasma / SRX4943812 (HMR)	schema
hide	SRX4943761	CpG methylation	Plasma / SRX4943761 (CpG methylation)	schema
hide	SRX4943761	AMR	Plasma / SRX4943761 (AMR)	schema
hide	SRX4943761	PMD	Plasma / SRX4943761 (PMD)	schema
hide	SRX4943761	CpG reads	Plasma / SRX4943761 (CpG reads)	schema
hide	SRX4943762	CpG reads	Plasma / SRX4943762 (CpG reads)	schema
hide	SRX4943762	CpG methylation	Plasma / SRX4943762 (CpG methylation)	schema
hide	SRX4943762	AMR	Plasma / SRX4943762 (AMR)	schema
hide	SRX4943762	PMD	Plasma / SRX4943762 (PMD)	schema
hide	SRX4943763	CpG reads	Plasma / SRX4943763 (CpG reads)	schema
hide	SRX4943763	CpG methylation	Plasma / SRX4943763 (CpG methylation)	schema
hide	SRX4943763	AMR	Plasma / SRX4943763 (AMR)	schema
hide	SRX4943763	PMD	Plasma / SRX4943763 (PMD)	schema
hide	SRX4943764	AMR	Plasma / SRX4943764 (AMR)	schema
hide	SRX4943764	PMD	Plasma / SRX4943764 (PMD)	schema
hide	SRX4943764	CpG reads	Plasma / SRX4943764 (CpG reads)	schema
hide	SRX4943764	CpG methylation	Plasma / SRX4943764 (CpG methylation)	schema
hide	SRX4943766	CpG reads	Plasma / SRX4943766 (CpG reads)	schema
hide	SRX4943766	CpG methylation	Plasma / SRX4943766 (CpG methylation)	schema
hide	SRX4943766	AMR	Plasma / SRX4943766 (AMR)	schema
hide	SRX4943766	PMD	Plasma / SRX4943766 (PMD)	schema
hide	SRX4943767	CpG reads	Plasma / SRX4943767 (CpG reads)	schema
hide	SRX4943767	CpG methylation	Plasma / SRX4943767 (CpG methylation)	schema
hide	SRX4943767	AMR	Plasma / SRX4943767 (AMR)	schema
hide	SRX4943767	PMD	Plasma / SRX4943767 (PMD)	schema
hide	SRX4943768	CpG reads	Plasma / SRX4943768 (CpG reads)	schema
hide	SRX4943768	CpG methylation	Plasma / SRX4943768 (CpG methylation)	schema
hide	SRX4943768	AMR	Plasma / SRX4943768 (AMR)	schema
hide	SRX4943768	PMD	Plasma / SRX4943768 (PMD)	schema
hide	SRX4943772	CpG reads	Plasma / SRX4943772 (CpG reads)	schema
hide	SRX4943772	CpG methylation	Plasma / SRX4943772 (CpG methylation)	schema
hide	SRX4943772	AMR	Plasma / SRX4943772 (AMR)	schema
hide	SRX4943772	PMD	Plasma / SRX4943772 (PMD)	schema
hide	SRX4943773	CpG reads	Plasma / SRX4943773 (CpG reads)	schema
hide	SRX4943773	CpG methylation	Plasma / SRX4943773 (CpG methylation)	schema
hide	SRX4943773	AMR	Plasma / SRX4943773 (AMR)	schema
hide	SRX4943773	PMD	Plasma / SRX4943773 (PMD)	schema
hide	SRX4943774	CpG reads	Plasma / SRX4943774 (CpG reads)	schema
hide	SRX4943774	CpG methylation	Plasma / SRX4943774 (CpG methylation)	schema
hide	SRX4943774	AMR	Plasma / SRX4943774 (AMR)	schema
hide	SRX4943774	PMD	Plasma / SRX4943774 (PMD)	schema
hide	SRX4943775	CpG reads	Plasma / SRX4943775 (CpG reads)	schema
hide	SRX4943775	CpG methylation	Plasma / SRX4943775 (CpG methylation)	schema
hide	SRX4943775	AMR	Plasma / SRX4943775 (AMR)	schema
hide	SRX4943775	PMD	Plasma / SRX4943775 (PMD)	schema
hide	SRX4943777	CpG reads	Plasma / SRX4943777 (CpG reads)	schema
hide	SRX4943777	CpG methylation	Plasma / SRX4943777 (CpG methylation)	schema
hide	SRX4943777	AMR	Plasma / SRX4943777 (AMR)	schema
hide	SRX4943777	PMD	Plasma / SRX4943777 (PMD)	schema
hide	SRX4943778	CpG reads	Plasma / SRX4943778 (CpG reads)	schema
hide	SRX4943778	CpG methylation	Plasma / SRX4943778 (CpG methylation)	schema
hide	SRX4943778	AMR	Plasma / SRX4943778 (AMR)	schema
hide	SRX4943778	PMD	Plasma / SRX4943778 (PMD)	schema
hide	SRX4943779	CpG reads	Plasma / SRX4943779 (CpG reads)	schema
hide	SRX4943779	CpG methylation	Plasma / SRX4943779 (CpG methylation)	schema
hide	SRX4943779	AMR	Plasma / SRX4943779 (AMR)	schema
hide	SRX4943779	PMD	Plasma / SRX4943779 (PMD)	schema
hide	SRX4943780	CpG reads	Plasma / SRX4943780 (CpG reads)	schema
hide	SRX4943780	CpG methylation	Plasma / SRX4943780 (CpG methylation)	schema
hide	SRX4943780	AMR	Plasma / SRX4943780 (AMR)	schema
hide	SRX4943780	PMD	Plasma / SRX4943780 (PMD)	schema
hide	SRX4943781	CpG reads	Plasma / SRX4943781 (CpG reads)	schema
hide	SRX4943781	CpG methylation	Plasma / SRX4943781 (CpG methylation)	schema
hide	SRX4943781	AMR	Plasma / SRX4943781 (AMR)	schema
hide	SRX4943781	PMD	Plasma / SRX4943781 (PMD)	schema
hide	SRX4943782	CpG reads	Plasma / SRX4943782 (CpG reads)	schema
hide	SRX4943782	CpG methylation	Plasma / SRX4943782 (CpG methylation)	schema
hide	SRX4943782	AMR	Plasma / SRX4943782 (AMR)	schema
hide	SRX4943782	PMD	Plasma / SRX4943782 (PMD)	schema
hide	SRX4943783	CpG reads	Plasma / SRX4943783 (CpG reads)	schema
hide	SRX4943783	CpG methylation	Plasma / SRX4943783 (CpG methylation)	schema
hide	SRX4943783	AMR	Plasma / SRX4943783 (AMR)	schema
hide	SRX4943783	PMD	Plasma / SRX4943783 (PMD)	schema
hide	SRX4943784	CpG reads	Plasma / SRX4943784 (CpG reads)	schema
hide	SRX4943784	CpG methylation	Plasma / SRX4943784 (CpG methylation)	schema
hide	SRX4943784	AMR	Plasma / SRX4943784 (AMR)	schema
hide	SRX4943784	PMD	Plasma / SRX4943784 (PMD)	schema
hide	SRX4943785	CpG methylation	Plasma / SRX4943785 (CpG methylation)	schema
hide	SRX4943785	AMR	Plasma / SRX4943785 (AMR)	schema
hide	SRX4943785	PMD	Plasma / SRX4943785 (PMD)	schema
hide	SRX4943785	CpG reads	Plasma / SRX4943785 (CpG reads)	schema
hide	SRX4943786	CpG reads	Plasma / SRX4943786 (CpG reads)	schema
hide	SRX4943786	CpG methylation	Plasma / SRX4943786 (CpG methylation)	schema
hide	SRX4943786	AMR	Plasma / SRX4943786 (AMR)	schema
hide	SRX4943786	PMD	Plasma / SRX4943786 (PMD)	schema
hide	SRX4943787	CpG reads	Plasma / SRX4943787 (CpG reads)	schema
hide	SRX4943787	CpG methylation	Plasma / SRX4943787 (CpG methylation)	schema
hide	SRX4943787	AMR	Plasma / SRX4943787 (AMR)	schema
hide	SRX4943787	PMD	Plasma / SRX4943787 (PMD)	schema
hide	SRX4943788	AMR	Plasma / SRX4943788 (AMR)	schema
hide	SRX4943788	CpG reads	Plasma / SRX4943788 (CpG reads)	schema
hide	SRX4943788	CpG methylation	Plasma / SRX4943788 (CpG methylation)	schema
hide	SRX4943788	PMD	Plasma / SRX4943788 (PMD)	schema
hide	SRX4943790	CpG reads	Plasma / SRX4943790 (CpG reads)	schema
hide	SRX4943790	CpG methylation	Plasma / SRX4943790 (CpG methylation)	schema
hide	SRX4943790	AMR	Plasma / SRX4943790 (AMR)	schema
hide	SRX4943790	PMD	Plasma / SRX4943790 (PMD)	schema
hide	SRX4943791	CpG reads	Plasma / SRX4943791 (CpG reads)	schema
hide	SRX4943791	CpG methylation	Plasma / SRX4943791 (CpG methylation)	schema
hide	SRX4943791	AMR	Plasma / SRX4943791 (AMR)	schema
hide	SRX4943791	PMD	Plasma / SRX4943791 (PMD)	schema
hide	SRX4943793	CpG reads	Plasma / SRX4943793 (CpG reads)	schema
hide	SRX4943793	CpG methylation	Plasma / SRX4943793 (CpG methylation)	schema
hide	SRX4943793	AMR	Plasma / SRX4943793 (AMR)	schema
hide	SRX4943793	PMD	Plasma / SRX4943793 (PMD)	schema
hide	SRX4943794	CpG reads	Plasma / SRX4943794 (CpG reads)	schema
hide	SRX4943794	CpG methylation	Plasma / SRX4943794 (CpG methylation)	schema
hide	SRX4943794	AMR	Plasma / SRX4943794 (AMR)	schema
hide	SRX4943794	PMD	Plasma / SRX4943794 (PMD)	schema
hide	SRX4943795	CpG reads	Plasma / SRX4943795 (CpG reads)	schema
hide	SRX4943795	CpG methylation	Plasma / SRX4943795 (CpG methylation)	schema
hide	SRX4943795	AMR	Plasma / SRX4943795 (AMR)	schema
hide	SRX4943795	PMD	Plasma / SRX4943795 (PMD)	schema
hide	SRX4943796	CpG reads	Plasma / SRX4943796 (CpG reads)	schema
hide	SRX4943796	CpG methylation	Plasma / SRX4943796 (CpG methylation)	schema
hide	SRX4943796	AMR	Plasma / SRX4943796 (AMR)	schema
hide	SRX4943796	PMD	Plasma / SRX4943796 (PMD)	schema
hide	SRX4943797	CpG reads	Plasma / SRX4943797 (CpG reads)	schema
hide	SRX4943797	CpG methylation	Plasma / SRX4943797 (CpG methylation)	schema
hide	SRX4943797	AMR	Plasma / SRX4943797 (AMR)	schema
hide	SRX4943797	PMD	Plasma / SRX4943797 (PMD)	schema
hide	SRX4943800	CpG reads	Plasma / SRX4943800 (CpG reads)	schema
hide	SRX4943800	CpG methylation	Plasma / SRX4943800 (CpG methylation)	schema
hide	SRX4943800	AMR	Plasma / SRX4943800 (AMR)	schema
hide	SRX4943800	PMD	Plasma / SRX4943800 (PMD)	schema
hide	SRX4943802	CpG reads	Plasma / SRX4943802 (CpG reads)	schema
hide	SRX4943802	CpG methylation	Plasma / SRX4943802 (CpG methylation)	schema
hide	SRX4943802	AMR	Plasma / SRX4943802 (AMR)	schema
hide	SRX4943802	PMD	Plasma / SRX4943802 (PMD)	schema
hide	SRX4943803	CpG reads	Plasma / SRX4943803 (CpG reads)	schema
hide	SRX4943803	CpG methylation	Plasma / SRX4943803 (CpG methylation)	schema
hide	SRX4943803	AMR	Plasma / SRX4943803 (AMR)	schema
hide	SRX4943803	PMD	Plasma / SRX4943803 (PMD)	schema
hide	SRX4943804	CpG reads	Plasma / SRX4943804 (CpG reads)	schema
hide	SRX4943804	CpG methylation	Plasma / SRX4943804 (CpG methylation)	schema
hide	SRX4943804	AMR	Plasma / SRX4943804 (AMR)	schema
hide	SRX4943804	PMD	Plasma / SRX4943804 (PMD)	schema
hide	SRX4943810	CpG reads	Plasma / SRX4943810 (CpG reads)	schema
hide	SRX4943810	CpG methylation	Plasma / SRX4943810 (CpG methylation)	schema
hide	SRX4943810	AMR	Plasma / SRX4943810 (AMR)	schema
hide	SRX4943810	PMD	Plasma / SRX4943810 (PMD)	schema
hide	SRX4943811	CpG reads	Plasma / SRX4943811 (CpG reads)	schema
hide	SRX4943811	CpG methylation	Plasma / SRX4943811 (CpG methylation)	schema
hide	SRX4943811	AMR	Plasma / SRX4943811 (AMR)	schema
hide	SRX4943811	PMD	Plasma / SRX4943811 (PMD)	schema
hide	SRX4943812	CpG reads	Plasma / SRX4943812 (CpG reads)	schema
hide	SRX4943812	CpG methylation	Plasma / SRX4943812 (CpG methylation)	schema
hide	SRX4943812	AMR	Plasma / SRX4943812 (AMR)	schema
hide	SRX4943812	PMD	Plasma / SRX4943812 (PMD)	schema

Study title: Homo sapiens Epigenomics
SRA: SRP167041
GEO: not found
Pubmed: not found

Experiment	Label	Methylation	Coverage	HMRs	HMR size	AMRs	AMR size	PMDs	PMD size	Conversion	Title
SRX4943649	Plasma	0.703	3.6	23718	1679.4	4758	8270.2	453	34758.1	0.977	WGBS of advanced Luminal B her2- subtype breast cancer ctDNA: TZ94
SRX4943650	Breast	0.722	8.7	30901	1414.0	34559	2868.2	1191	547487.1	0.984	WGBS of early HER2 subtype breast carcinoma tissue: FD27T
SRX4943652	Breast	0.701	8.9	52346	4621.6	37667	3331.3	1508	383487.8	0.981	WGBS of early Luminal B subtype breast carcinoma tissue: FD17T
SRX4943654	Breast	0.761	9.5	39950	1284.3	19639	3288.8	1641	33912.4	0.986	WGBS of early Luminal B subtype breast pare-carcinoma tissue: FD17N
SRX4943655	Plasma	0.712	3.2	26898	1986.7	4262	8814.4	848	768163.8	0.980	WGBS of advanced TNBC subtype breast cancer ctDNA: TZ88
SRX4943657	Plasma	0.753	3.2	23304	1752.6	1929	17071.0	532	47551.9	0.983	WGBS of advanced HER2 subtype breast cancer ctDNA: TZ85
SRX4943658	Plasma	0.747	3.5	30178	1313.4	2257	14794.6	534	35293.5	0.920	WGBS of early Luminal B her2- subtype breast cancer ctDNA: TZ84
SRX4943659	Plasma	0.656	3.5	37895	4781.7	3526	10010.5	1088	781194.1	0.952	WGBS of early TNBC subtype breast cancer ctDNA: TZ80
SRX4943660	Plasma	0.729	3.8	22322	1743.3	3537	10373.0	630	29506.6	0.976	WGBS of advanced TNBC subtype breast cancer ctDNA: TZ97
SRX4943661	Plasma	0.711	3.4	18463	1785.0	2813	12521.0	543	31393.8	0.973	WGBS of advanced Luminal B her2+ subtype breast cancer ctDNA: TZ95
SRX4943663	Plasma	0.741	3.3	21725	1833.9	2605	12967.2	451	32120.3	0.975	WGBS of healthy human cfDNA: N0034
SRX4943664	Plasma	0.747	2.7	25456	1719.1	1396	22253.2	517	33874.1	0.971	WGBS of healthy human cfDNA: N0028
SRX4943665	Plasma	0.738	3.2	24571	1756.0	2575	13311.5	522	26441.4	0.950	WGBS of healthy human cfDNA: N0027
SRX4943666	Plasma	0.759	2.9	26164	1671.6	1208	25431.3	562	30931.2	0.975	WGBS of healthy human cfDNA: N0026
SRX4943668	Plasma	0.745	4.5	27041	1620.6	4137	8854.1	924	21720.1	0.983	WGBS of healthy human cfDNA: N0033
SRX4943669	Plasma	0.739	3.9	22754	1794.7	2031	16149.6	835	28577.4	0.973	WGBS of healthy human cfDNA: N0032
SRX4943670	Plasma	0.740	3.0	26176	1693.6	1942	16775.1	515	30966.6	0.957	WGBS of healthy human cfDNA: N0031
SRX4943671	Plasma	0.742	3.2	28728	1637.8	1226	25151.1	776	24613.8	0.973	WGBS of healthy human cfDNA: N0029
SRX4943672	Breast	0.777	8.4	37177	1325.2	12352	4107.9	1029	36320.9	0.985	WGBS of early HER2 subtype breast pare-carcinoma tissue: FD27N
SRX4943673	Plasma	0.781	3.7	27652	1566.3	1807	17611.2	740	26551.1	0.973	WGBS of healthy human cfDNA: N0040
SRX4943674	Plasma	0.662	3.7	42047	7050.3	8821	5521.9	1214	531658.7	0.975	WGBS of advanced Luminal B her2- subtype breast cancer ctDNA: TZ69
SRX4943675	Plasma	0.744	3.3	28100	1664.7	3264	10508.5	608	33917.5	0.970	WGBS of healthy human cfDNA: N0041
SRX4943676	Plasma	0.750	2.8	28073	1595.6	3048	11099.2	344	43795.7	0.966	WGBS of healthy human cfDNA: N0042
SRX4943677	Plasma	0.791	3.7	27918	1585.8	1556	20180.8	900	28039.1	0.970	WGBS of healthy human cfDNA: N0043
SRX4943679	Plasma	0.776	2.9	26008	1719.3	1416	21661.5	663	41412.3	0.981	WGBS of healthy human cfDNA: N0037
SRX4943681	Plasma	0.771	2.9	26492	1589.6	1953	16247.1	546	32312.0	0.970	WGBS of healthy human cfDNA: N0039
SRX4943683	Plasma	0.772	3.8	29754	1609.1	2179	15122.7	788	29300.8	0.981	WGBS of healthy human cfDNA: N0045
SRX4943686	Plasma	0.750	3.3	24105	1830.8	1897	17151.8	626	44086.5	0.980	WGBS of early Luminal A subtype breast cancer ctDNA: XH23
SRX4943687	Plasma	0.770	3.1	29531	1597.3	1341	22958.8	711	34882.2	0.981	WGBS of early HER2 subtype breast cancer ctDNA: XH21
SRX4943688	Breast	0.744	9.6	33474	1300.4	37221	3018.6	1037	1004643.8	0.983	WGBS of early TNBC subtype breast carcinoma tissue: FD4T
SRX4943689	Breast	0.755	8.8	36656	1255.4	18028	3318.2	1123	22192.0	0.982	WGBS of early TNBC subtype breast pare-carcinoma tissue: FD4N
SRX4943690	Breast	0.712	9.4	41799	2767.5	74160	3399.3	1663	618184.3	0.988	WGBS of early Luminal A subtype breast carcinoma tissue: FD16T
SRX4943691	Breast	0.782	8.3	39113	1296.2	13858	3920.4	1724	26474.8	0.991	WGBS of early Luminal A subtype breast pare-carcinoma tissue: FD16N
SRX4943692	Plasma	0.733	2.8	24201	1783.5	1751	18167.8	520	37580.9	0.976	WGBS of early Luminal B her2+ subtype breast cancer ctDNA: TZ68
SRX4943697	Plasma	0.759	4.3	32970	1539.3	961	31632.2	920	30735.8	0.984	WGBS of advanced Luminal A subtype breast cancer ctDNA: TZ10
SRX4943698	Plasma	0.746	5.0	31688	1483.8	2771	12387.0	881	25405.2	0.982	WGBS of advanced TNBC subtype breast cancer ctDNA: TZ9
SRX4943699	Plasma	0.746	2.8	25452	1814.0	2102	15139.7	525	45867.4	0.978	WGBS of advanced Luminal B her2+ subtype breast cancer ctDNA: TZ12
SRX4943701	Plasma	0.771	4.5	32331	1443.0	1295	23989.7	735	25881.4	0.982	WGBS of advanced Luminal B her2- subtype breast cancer ctDNA: TZ15
SRX4943703	Plasma	0.632	4.0	29103	2514.8	27231	3795.1	596	1571973.3	0.975	WGBS of advanced bilateral subtype breast cancer ctDNA: TZ76
SRX4943705	Plasma	0.739	2.3	23544	1926.1	1800	17410.3	431	50151.9	0.976	WGBS of advanced Luminal B her2- subtype breast cancer ctDNA: TZ19
SRX4943706	Plasma	0.764	4.3	28266	1511.0	1252	24912.8	888	27894.5	0.982	WGBS of early unknown subtype breast cancer ctDNA: TZ16
SRX4943707	Plasma	0.732	4.0	28967	1587.0	2819	12289.2	745	17034.1	0.979	WGBS of advanced unknown subtype breast cancer ctDNA: TZ17
SRX4943709	Plasma	0.566	5.2	31896	18914.5	14753	4497.4	1986	431428.4	0.981	WGBS of advanced Luminal B her2- subtype breast cancer ctDNA: TZ24
SRX4943710	Plasma	0.682	4.9	23743	2100.4	13456	4655.5	1526	162350.9	0.986	WGBS of advanced unknown subtype breast cancer ctDNA: TZ20
SRX4943711	Plasma	0.733	3.6	24139	1768.6	2577	13192.9	655	29842.6	0.976	WGBS of early Luminal B her2+ subtype breast cancer ctDNA: TZ21
SRX4943712	Plasma	0.605	5.3	27355	1977.0	9187	5380.2	618	1793549.4	0.982	WGBS of advanced Luminal B her2- subtype breast cancer ctDNA: TZ25
SRX4943713	Plasma	0.702	4.7	24994	1730.4	12877	5070.5	1291	582744.8	0.984	WGBS of advanced Luminal B her2- subtype breast cancer ctDNA: TZ27
SRX4943714	Plasma	0.742	2.3	25140	1690.2	491	58874.8	619	37105.4	0.978	WGBS of early unknown subtype breast cancer ctDNA: TZ78
SRX4943715	Plasma	0.741	3.0	24577	1735.0	2646	12739.1	488	50481.0	0.975	WGBS of advanced Luminal B her2+ subtype breast cancer ctDNA: TZ63
SRX4943716	Plasma	0.745	5.1	26782	1498.6	5941	6763.5	820	22473.2	0.983	WGBS of advanced TNBC subtype breast cancer ctDNA: TZ38
SRX4943717	Plasma	0.741	5.4	31986	1524.4	5481	7333.5	819	25676.4	0.981	WGBS of advanced TNBC subtype breast cancer ctDNA: TZ37
SRX4943718	Plasma	0.678	4.3	22956	1758.1	14463	4671.8	698	26472.4	0.971	WGBS of advanced Luminal A subtype breast cancer ctDNA: TZ36
SRX4943719	Plasma	0.731	4.8	25523	1702.9	4834	8089.8	755	18413.7	0.983	WGBS of advanced Luminal B her2- subtype breast cancer ctDNA: TZ34
SRX4943720	Plasma	0.717	5.1	25669	1730.5	4834	8091.4	902	28969.3	0.985	WGBS of advanced Luminal B her2- subtype breast cancer ctDNA: TZ33
SRX4943721	Plasma	0.519	3.3	15640	31548.9	7773	5665.7	1743	648126.1	0.972	WGBS of advanced TNBC subtype breast cancer ctDNA: TZ32
SRX4943722	Plasma	0.722	3.8	25995	1785.3	2835	12081.6	814	50002.3	0.962	WGBS of advanced Luminal B her2- subtype breast cancer ctDNA: TZ31
SRX4943723	Plasma	0.734	4.2	30206	1622.2	1690	19524.5	844	33587.7	0.981	WGBS of advanced TNBC subtype breast cancer ctDNA: TZ30
SRX4943724	Plasma	0.739	4.8	33841	1463.5	5027	8140.1	989	40459.6	0.986	WGBS of advanced Luminal B her2- subtype breast cancer ctDNA: TZ29
SRX4943725	Plasma	0.721	5.8	33363	1438.0	3859	9333.9	1154	16403.3	0.984	WGBS of early TNBC subtype breast cancer ctDNA: TZ28
SRX4943727	Plasma	0.730	3.6	29393	1632.1	2171	15077.7	793	29508.7	0.977	WGBS of early Luminal A subtype breast cancer ctDNA: TZ52
SRX4943728	Plasma	0.708	2.9	28254	1760.4	2908	11920.7	443	46257.5	0.958	WGBS of advanced TNBC subtype breast cancer ctDNA: TZ51
SRX4943729	Plasma	0.620	3.1	40122	5224.5	2730	12525.9	963	831701.8	0.984	WGBS of early TNBC subtype breast cancer ctDNA: TZ71
SRX4943730	Plasma	0.758	3.3	28827	1561.2	1644	19391.3	726	25505.3	0.977	WGBS of early HER2 subtype breast cancer ctDNA: TZ54
SRX4943733	Plasma	0.779	4.0	32861	1519.1	1900	16717.7	848	33153.5	0.982	WGBS of early Luminal A subtype breast cancer ctDNA: XH9
SRX4943736	Plasma	0.767	3.7	24135	1572.1	1236	25083.6	601	30946.7	0.978	WGBS of early Luminal A subtype breast cancer ctDNA: XH12
SRX4943737	Plasma	0.784	3.7	31418	1624.5	1617	19355.7	855	32580.6	0.981	WGBS of early Luminal A subtype breast cancer ctDNA: XH4
SRX4943738	Plasma	0.785	4.2	31251	1579.2	1951	16393.4	751	34475.7	0.978	WGBS of early HER2 subtype breast cancer ctDNA: XH5
SRX4943739	Plasma	0.793	3.7	32765	1510.2	1688	18527.5	714	34454.2	0.977	WGBS of early HER2 subtype breast cancer ctDNA: XH6
SRX4943740	Plasma	0.787	3.4	26642	1591.8	746	39879.5	644	30282.3	0.981	WGBS of early Luminal A subtype breast cancer ctDNA: XH8
SRX4943741	Plasma	0.720	3.2	23883	1857.8	2764	12189.0	471	35695.7	0.971	WGBS of advanced Luminal B her2- subtype breast cancer ctDNA: TZ49
SRX4943742	Plasma	0.744	3.1	30575	1652.3	1411	21966.6	655	25523.1	0.979	WGBS of advanced TNBC subtype breast cancer ctDNA: TZ50
SRX4943743	Plasma	0.740	4.1	27098	1684.7	5602	7162.4	625	31375.9	0.980	WGBS of advanced Luminal B her2- subtype breast cancer ctDNA: TZ75
SRX4943744	Plasma	0.779	3.2	25430	1645.0	1464	21568.0	541	33134.3	0.975	WGBS of advanced Luminal B her2- subtype breast cancer ctDNA: TZ145
SRX4943745	Plasma	0.732	4.1	26433	1580.7	4978	7612.3	654	61509.2	0.966	WGBS of advanced HER2 subtype breast cancer ctDNA: TZ146
SRX4943746	Plasma	0.750	4.0	27098	1656.5	1972	16507.3	726	26030.5	0.964	WGBS of advanced Luminal B her2- subtype breast cancer ctDNA: TZ143
SRX4943747	Plasma	0.742	4.1	24677	1742.7	3994	9115.7	645	29216.3	0.940	WGBS of early Luminal B her2- subtype breast cancer ctDNA: TZ144
SRX4943748	Plasma	0.764	2.8	25536	1726.1	1727	18523.4	636	35906.7	0.962	WGBS of early Luminal B her2- subtype breast cancer ctDNA: TZ137
SRX4943749	Plasma	0.744	3.8	30830	1617.3	1905	17089.2	791	25412.1	0.978	WGBS of early Luminal B her2- subtype breast cancer ctDNA: TZ142
SRX4943750	Plasma	0.756	3.6	27006	1604.5	1992	16237.7	616	28298.9	0.967	WGBS of advanced Luminal B her2- subtype breast cancer ctDNA: TZ135
SRX4943751	Plasma	0.770	3.6	26739	1582.5	979	31121.1	721	33097.4	0.980	WGBS of early Luminal B her2+ subtype breast cancer ctDNA: TZ136
SRX4943752	Plasma	0.725	4.4	28623	1722.8	4771	8005.6	1742	100610.0	0.979	WGBS of advanced Luminal A subtype breast cancer ctDNA: TZ132
SRX4943753	Plasma	0.761	3.4	27238	1679.2	1432	21831.4	652	27145.4	0.949	WGBS of advanced Luminal B her2+ subtype breast cancer ctDNA: TZ134
SRX4943754	Plasma	0.700	3.0	28855	2337.0	8138	5608.8	671	1308858.9	0.978	WGBS of advanced TNBC subtype breast cancer ctDNA: TZ43
SRX4943755	Plasma	0.783	3.9	31023	1527.2	1984	16106.1	781	31392.4	0.978	WGBS of early Luminal B her2+ subtype breast cancer ctDNA: XH2
SRX4943756	Plasma	0.775	3.7	29313	1583.4	1436	21797.0	766	34509.5	0.974	WGBS of early HER2 subtype breast cancer ctDNA: XH1
SRX4943757	Plasma	0.736	3.6	27865	1719.4	5107	7187.9	621	35081.6	0.973	WGBS of advanced Luminal B her2- subtype breast cancer ctDNA: TZ153
SRX4943758	Plasma	0.760	3.2	21885	1684.1	4703	7917.6	632	102494.4	0.982	WGBS of advanced TNBC subtype breast cancer ctDNA: TZ152
SRX4943759	Plasma	0.789	3.6	23827	1625.2	1254	24622.2	765	30528.9	0.982	WGBS of early HER2 subtype breast cancer ctDNA: TZ151
SRX4943760	Plasma	0.762	3.8	24910	1717.8	2313	14228.0	755	36879.6	0.973	WGBS of early Luminal B her2+ subtype breast cancer ctDNA: TZ148
SRX4943761	Plasma	0.753	3.6	31639	1586.3	1480	21077.1	704	28989.5	0.981	WGBS of advanced HER2 subtype breast cancer ctDNA: TZ160
SRX4943762	Plasma	0.676	3.2	36601	8016.1	11390	4576.6	1128	578674.4	0.979	WGBS of advanced Luminal B her2- subtype breast cancer ctDNA: TZ158
SRX4943763	Plasma	0.731	3.5	26773	1900.3	3748	9502.4	1189	212918.5	0.982	WGBS of advanced Luminal B her2+ subtype breast cancer ctDNA: TZ155
SRX4943764	Plasma	0.786	3.8	30208	1594.2	1915	16530.8	802	27111.5	0.959	WGBS of advanced Luminal B her2- subtype breast cancer ctDNA: TZ154
SRX4943766	Plasma	0.716	3.1	25939	1796.9	1922	16627.9	410	38252.6	0.975	WGBS of advanced Luminal B her2- subtype breast cancer ctDNA: TZ57
SRX4943767	Plasma	0.739	3.6	25488	1659.0	4385	8601.9	419	35157.7	0.980	WGBS of early Luminal A subtype breast cancer ctDNA: TZ61
SRX4943768	Plasma	0.735	3.5	28355	1689.4	3343	10376.7	552	30166.6	0.973	WGBS of advanced Luminal B her2+ subtype breast cancer ctDNA: TZ59
SRX4943772	Plasma	0.730	4.4	35691	1550.1	3162	10867.9	1044	22656.3	0.975	WGBS of early Luminal B her2- subtype breast cancer ctDNA: TZ53
SRX4943773	Plasma	0.758	4.6	29282	1620.4	3710	9456.8	718	31907.8	0.981	WGBS of early Luminal B her2- subtype breast cancer ctDNA: TZ127
SRX4943774	Plasma	0.781	5.9	35394	1434.7	6346	6166.5	999	28583.6	0.979	WGBS of advanced Luminal B her2- subtype breast cancer ctDNA: TZ125
SRX4943775	Plasma	0.767	3.5	25443	1642.0	2295	14294.6	607	32018.4	0.966	WGBS of early HER2 subtype breast cancer ctDNA: TZ129
SRX4943777	Plasma	0.739	3.5	30040	1625.1	1944	16846.5	703	28207.3	0.973	WGBS of early Luminal B her2- subtype breast cancer ctDNA: TZ116
SRX4943778	Plasma	0.756	2.7	26175	1722.6	1986	15893.4	330	40477.4	0.967	WGBS of advanced Luminal B her2+ subtype breast cancer ctDNA: TZ114
SRX4943779	Plasma	0.771	3.3	32077	1568.0	1161	26413.3	569	35111.3	0.976	WGBS of early HER2 subtype breast cancer ctDNA: TZ121
SRX4943780	Plasma	0.748	2.7	24610	1807.6	1556	20111.3	403	48571.6	0.976	WGBS of advanced Luminal A subtype breast cancer ctDNA: TZ120
SRX4943781	Plasma	0.758	4.5	31061	1514.5	2500	13474.9	849	19562.4	0.982	WGBS of advanced Luminal B her2- subtype breast cancer ctDNA: TZ39
SRX4943782	Plasma	0.766	4.1	30901	1499.9	1286	24099.0	775	20605.2	0.979	WGBS of advanced TNBC subtype breast cancer ctDNA: TZ40
SRX4943783	Plasma	0.740	4.2	26700	1603.0	1354	23034.9	655	23284.8	0.980	WGBS of early unknown subtype breast cancer ctDNA: TZ41
SRX4943784	Plasma	0.729	2.1	24255	1930.6	1523	19737.3	378	90075.9	0.977	WGBS of advanced Luminal A subtype breast cancer ctDNA: TZ112
SRX4943785	Plasma	0.728	2.7	27964	1723.0	1764	18073.3	602	28255.2	0.972	WGBS of early Luminal B her2- subtype breast cancer ctDNA: TZ113
SRX4943786	Plasma	0.717	3.4	25038	1877.9	2618	12870.5	741	52400.5	0.974	WGBS of advanced Luminal B her2+ subtype breast cancer ctDNA: TZ48
SRX4943787	Plasma	0.760	3.0	25922	1772.5	1282	23985.9	503	31423.4	0.981	WGBS of advanced TNBC subtype breast cancer ctDNA: TZ42
SRX4943788	Plasma	0.736	3.2	20448	1885.9	3161	11217.5	510	31567.9	0.967	WGBS of early TNBC subtype breast cancer ctDNA: TZ66
SRX4943790	Plasma	0.640	4.2	30016	2669.2	33884	3521.4	687	1408610.6	0.979	WGBS of advanced Luminal B her2- subtype breast cancer ctDNA: TZ64
SRX4943791	Plasma	0.639	2.4	23322	2314.2	2629	12361.6	251	30807.8	0.969	WGBS of advanced unknown subtype breast cancer ctDNA: TZ65
SRX4943793	Plasma	0.737	2.3	22807	1891.1	1453	21166.5	457	41275.5	0.978	WGBS of early TNBC subtype breast cancer ctDNA: TZ103
SRX4943794	Plasma	0.750	3.5	25137	1534.6	2235	14981.5	513	28131.2	0.974	WGBS of advanced HER2 subtype breast cancer ctDNA: TZ105
SRX4943795	Plasma	0.749	4.1	21743	1602.7	3958	9435.9	501	28124.7	0.968	WGBS of early Luminal A subtype breast cancer ctDNA: TZ106
SRX4943796	Plasma	0.650	3.5	40223	5932.6	6339	6968.8	979	741554.6	0.972	WGBS of advanced Luminal B her2+ subtype breast cancer ctDNA: TZ107
SRX4943797	Plasma	0.747	3.2	29620	1585.8	3431	10120.0	597	31947.1	0.981	WGBS of early TNBC subtype breast cancer ctDNA: TZ108
SRX4943800	Plasma	0.765	4.1	25616	1654.3	2779	12373.5	523	31655.4	0.980	WGBS of advanced Luminal B her2- subtype breast cancer ctDNA: TZ46
SRX4943802	Plasma	0.751	3.8	23913	1588.5	1717	18829.0	605	29280.4	0.964	WGBS of healthy human cfDNA: N0024
SRX4943803	Plasma	0.755	3.7	27883	1603.1	839	35538.9	750	25316.4	0.992	WGBS of healthy human cfDNA: N0021
SRX4943804	Plasma	0.768	3.6	34519	1423.3	976	30989.1	745	29420.0	0.993	WGBS of healthy human cfDNA: N0022
SRX4943810	Plasma	0.758	3.4	28126	1656.6	1319	23359.9	681	26861.0	0.980	WGBS of healthy human cfDNA: N0014
SRX4943811	Plasma	0.759	3.1	24640	1760.1	788	38180.9	778	36710.1	0.992	WGBS of healthy human cfDNA: N0011
SRX4943812	Plasma	0.753	4.0	32752	1507.0	1133	27136.4	810	21414.0	0.991	WGBS of healthy human cfDNA: N0012

Methods

All analysis was done using a bisulfite sequnecing data analysis pipeline DNMTools developed in the Smith lab at USC.

Mapping reads from bisulfite sequencing: Bisulfite treated reads are mapped to the genomes with the abismal program. Input reads are filtered by their quality, and adapter sequences in the 3' end of reads are trimmed. This is done with cutadapt. Uniquely mapped reads with mismatches/indels below given threshold are retained. For pair-end reads, if the two mates overlap, the overlapping part of the mate with lower quality is discarded. After mapping, we use the format command in dnmtools to merge mates for paired-end reads. We use the dnmtools uniq command to randomly select one from multiple reads mapped exactly to the same location. Without random oligos as UMIs, this is our best indication of PCR duplicates.

Estimating methylation levels: After reads are mapped and filtered, the dnmtools counts command is used to obtain read coverage and estimate methylation levels at individual cytosine sites. We count the number of methylated reads (those containing a C) and the number of unmethylated reads (those containing a T) at each nucleotide in a mapped read that corresponds to a cytosine in the reference genome. The methylation level of that cytosine is estimated as the ratio of methylated to total reads covering that cytosine. For cytosines in the symmetric CpG sequence context, reads from the both strands are collapsed to give a single estimate. Very rarely do the levels differ between strands (typically only if there has been a substitution, as in a somatic mutation), and this approach gives a better estimate.

Bisulfite conversion rate: The bisulfite conversion rate for an experiment is estimated with the dnmtools bsrate command, which computes the fraction of successfully converted nucleotides in reads (those read out as Ts) among all nucleotides in the reads mapped that map over cytosines in the reference genome. This is done either using a spike-in (e.g., lambda), the mitochondrial DNA, or the nuclear genome. In the latter case, only non-CpG sites are used. While this latter approach can be impacted by non-CpG cytosine methylation, in practice it never amounts to much.

Identifying hypomethylated regions (HMRs): In most mammalian cells, the majority of the genome has high methylation, and regions of low methylation are typically the interesting features. (This seems to be true for essentially all healthy differentiated cell types, but not cells of very early embryogenesis, various germ cells and precursors, and placental lineage cells.) These are valleys of low methylation are called hypomethylated regions (HMR) for historical reasons. To identify the HMRs, we use the dnmtools hmr command, which uses a statistical model that accounts for both the methylation level fluctations and the varying amounts of data available at each CpG site.

Partially methylated domains: Partially methylated domains are large genomic regions showing partial methylation observed in immortalized cell lines and cancerous cells. The pmd program is used to identify PMDs.

Allele-specific methylation: Allele-Specific methylated regions refers to regions where the parental allele is differentially methylated compared to the maternal allele. The program allelic is used to compute allele-specific methylation score can be computed for each CpG site by testing the linkage between methylation status of adjacent reads, and the program amrfinder is used to identify regions with allele-specific methylation.

For more detailed description of the methods of each step, please refer to the DNMTools documentation.