GNF U74C Track Settings
 
GNF Expression Atlas on Mouse Affymetrix U74C Chip   (All Expression and Regulation tracks)

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Data last updated: 2007-09-10

Description

This track shows expression data from GNF (The Genomics Institute of the Novartis Research Foundation) using the Affymetrix U74C chip.

Methods

For detailed information about the experiments, see Su et al. (2002) in the References section below. Alignments displayed on the track correspond to the consensus sequences used by Affymetrix to choose probes.

In dense mode, the track color denotes the average signal over all experiments on a log base 2 scale. Lighter colors correspond to lower signals and darker colors correspond to higher signals. In full mode, the color of each item represents the log base 2 ratio of the signal of that particular experiment to the median signal of all experiments for that probe.

More information about individual probes and probe sets is available at Affymetrix's NetAffx website.

Credits

Thanks to GNF for providing these data.

References

Su AI, Cooke MP, Ching KA, Hakak Y, Walker JR, Wiltshire T, Orth AP, Vega RG, Sapinoso LM, Moqrich A et al. Large-scale analysis of the human and mouse transcriptomes. Proc Natl Acad Sci U S A. 2002 Apr 2;99(7):4465-70. PMID: 11904358; PMC: PMC123671